Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 10413
Gene Symbol: YAP1
YAP1
0.080 Biomarker disease BEFREE β-catenin, GAB1 and YAP1 were the only IHC markers of utility in classification of MBs into three subgroups viz. 26222673 2016
Entrez Id: 2549
Gene Symbol: GAB1
GAB1
0.020 Biomarker disease BEFREE β-catenin, GAB1 and YAP1 were the only IHC markers of utility in classification of MBs into three subgroups viz. 26222673 2016
Entrez Id: 6469
Gene Symbol: SHH
SHH
0.100 Biomarker disease BEFREE β-arrestin1-mediated acetylation of Gli1 regulates Hedgehog/Gli signaling and modulates self-renewal of SHH medulloblastoma cancer stem cells. 28716052 2017
Entrez Id: 595
Gene Symbol: CCND1
CCND1
0.070 Biomarker disease BEFREE WNT/beta-catenin pathway status was investigated by immunohistochemical analysis of CTNNB1 and the pathway target cyclin D1 (CCND1) in 49 CNS PNETs and 46 medulloblastomas. 19293793 2009
Entrez Id: 1499
Gene Symbol: CTNNB1
CTNNB1
0.800 GeneticVariation disease BEFREE WNT-activated MDB is associated to monosomy 6, CTNNB1, DDX3X and TP53 mutations, beta-catenin nuclear immunoexpression, and a better prognosis than SHH-activated MDB. 29582169 2018
Entrez Id: 1786
Gene Symbol: DNMT1
DNMT1
0.340 Biomarker disease BEFREE Within this review, we summarize the main preclinical studies regarding epigenetic targets (such as HDAC, SIRT, BET, EZH2, G9a, LSD1, and DNMT) inhibitors in medulloblastoma. 30560106 2018
Entrez Id: 7018
Gene Symbol: TF
TF
0.010 AlteredExpression disease BEFREE With respect to clinical efficacy, the reduced expression of TR on DAOY medulloblastoma in vivo may be less significant than expected because of the extreme potency of immunotoxins observed in central nervous system tumors. 7643997 1995
Entrez Id: 596
Gene Symbol: BCL2
BCL2
0.100 AlteredExpression disease BEFREE With regard to tumors of central nervous system origin, bcl2 expression was absent from most medulloblastomas but was detected at moderate to low levels in a retinoblastoma and some glioblastoma multiforme cell lines. 1742726 1991
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.200 GeneticVariation disease BEFREE Whilst drugs directly targeting SIRT1, were potent to trigger cell death at high concentrations only, introduction of synthetic miR-34a mimics was able to induce cell death in p53 mutated medulloblastoma and glioblastoma cell lines. 25250818 2014
Entrez Id: 407040
Gene Symbol: MIR34A
MIR34A
0.050 Biomarker disease BEFREE Whilst drugs directly targeting SIRT1, were potent to trigger cell death at high concentrations only, introduction of synthetic miR-34a mimics was able to induce cell death in p53 mutated medulloblastoma and glioblastoma cell lines. 25250818 2014
Entrez Id: 23411
Gene Symbol: SIRT1
SIRT1
0.040 Biomarker disease BEFREE Whilst drugs directly targeting SIRT1, were potent to trigger cell death at high concentrations only, introduction of synthetic miR-34a mimics was able to induce cell death in p53 mutated medulloblastoma and glioblastoma cell lines. 25250818 2014
Entrez Id: 8842
Gene Symbol: PROM1
PROM1
0.090 AlteredExpression disease BEFREE While most medulloblastoma samples expressed CD133 and LIN28, OCT4 expression was found to be more sporadic, with detectable levels occurring in 48% of tumors. 21725800 2012
Entrez Id: 324
Gene Symbol: APC
APC
0.700 GeneticVariation disease BEFREE While germline APC mutations predispose to WNT MB, germline mutations in SUFU, PTCH1, and TP53 predispose to SHH tumors. 24115570 2014
Entrez Id: 10985
Gene Symbol: GCN1
GCN1
0.010 AlteredExpression disease BEFREE While all strains replicated at low levels in the medulloblastoma cell line DAOY from a cerebellar neuronal tumour, JCV(Mad1) replicated better in astroglial SVG cells than JCV(Mad1D) or JCV(GCN1) and all strains replicated at higher levels in COS-7 kidney cells, suggesting that the GCN1-deletion confers a disadvantage for viral growth in central nervous system white matter. 21940415 2012
Entrez Id: 4084
Gene Symbol: MXD1
MXD1
0.020 AlteredExpression disease BEFREE While all strains replicated at low levels in the medulloblastoma cell line DAOY from a cerebellar neuronal tumour, JCV(Mad1) replicated better in astroglial SVG cells than JCV(Mad1D) or JCV(GCN1) and all strains replicated at higher levels in COS-7 kidney cells, suggesting that the GCN1-deletion confers a disadvantage for viral growth in central nervous system white matter. 21940415 2012
Entrez Id: 8379
Gene Symbol: MAD1L1
MAD1L1
0.010 AlteredExpression disease BEFREE While all strains replicated at low levels in the medulloblastoma cell line DAOY from a cerebellar neuronal tumour, JCV(Mad1) replicated better in astroglial SVG cells than JCV(Mad1D) or JCV(GCN1) and all strains replicated at higher levels in COS-7 kidney cells, suggesting that the GCN1-deletion confers a disadvantage for viral growth in central nervous system white matter. 21940415 2012
Entrez Id: 4440
Gene Symbol: MSI1
MSI1
0.050 AlteredExpression disease BEFREE While Msi1 is barely detected in normal adult tissue, it has been observed to be highly expressed in numerous tumor types (e.g. breast, colon, medulloblastoma, glioblastoma, and et cetera). 21881409 2013
Entrez Id: 4613
Gene Symbol: MYCN
MYCN
0.500 Biomarker disease BEFREE Whereas MYC/MYCN oncogene amplifications had a high prognostic value in pediatric MB, these aberrations were rarely observed in adult tumors. 20479417 2010
Entrez Id: 9734
Gene Symbol: HDAC9
HDAC9
0.040 AlteredExpression disease BEFREE Whereas high HDAC1 and low REN expression in neural progenitors and medulloblastomas correlates with active Hedgehog signalling, loss of HDAC activity suppresses Hedgehog-dependent growth of neural progenitors and tumour cells. 20081843 2010
Entrez Id: 5972
Gene Symbol: REN
REN
0.020 AlteredExpression disease BEFREE Whereas high HDAC1 and low REN expression in neural progenitors and medulloblastomas correlates with active Hedgehog signalling, loss of HDAC activity suppresses Hedgehog-dependent growth of neural progenitors and tumour cells. 20081843 2010
Entrez Id: 3065
Gene Symbol: HDAC1
HDAC1
0.030 AlteredExpression disease BEFREE Whereas high HDAC1 and low REN expression in neural progenitors and medulloblastomas correlates with active Hedgehog signalling, loss of HDAC activity suppresses Hedgehog-dependent growth of neural progenitors and tumour cells. 20081843 2010
Entrez Id: 5727
Gene Symbol: PTCH1
PTCH1
0.900 GeneticVariation disease BEFREE Whereas Gorlin's syndrome patients carry germ-line mutations in the patched (PTCH) gene, Turcot's syndrome patients with MBs carry germ-line mutations of the adenomatous polyposis coli (APC) gene. 11585731 2001
Entrez Id: 5727
Gene Symbol: PTCH1
PTCH1
0.900 GeneticVariation disease BEFREE Whereas genetic mutations in PTCH1 have previously been shown to lead to medulloblastoma, our study indicates that epigenetic silencing of PTCH1, and other critical developmental loci, by DNA methylation is a fundamental process of pediatric medulloblastoma formation. 19966297 2010
Entrez Id: 1499
Gene Symbol: CTNNB1
CTNNB1
0.800 GeneticVariation disease BEFREE Whereas APC mutations are rare in sporadic MBs, a hot-spot region of beta-catenin (CTNNB1) mutations was identified in a subset of MBs. 11585731 2001
Entrez Id: 2475
Gene Symbol: MTOR
MTOR
0.050 AlteredExpression disease BEFREE When using RNAi and a pharmacological inhibitor selective for PCTK1, we could show that this kinase plays a crucial role in the proliferation of MB cell lines and the activation of the mammalian target of rapamycin (mTOR) pathway. 25402633 2015